... The clutch engages closer to the floor now...
That's expected. As far as I can tell, the master/slave relationship doesn't adjust like the brakes do. So, if you work out the geometry (a friend of mine and I did just this earlier this week), when the clutch disk is new (thickest) the engage/disengage point will be towards the bottom of your pedal travel. As the disc wears, that point will move upwards. My clutch has 110,000+ miles on it now, and the engagement point is towards the top of the travel.
HTH, and have a good one,