The outputs of all BOSE head units are flat. The equalization (BOSE magic) happens in the amplifier. The C6 does not have the GM SMART AMP system so the outputs are variable and analog. There is really nothing the CL441dsp needs to correct.
Many OEM systems employ a bass attenuation circuit as the volume is increased to protect the cheap OEM speakers. The also usually boost the low frequency at low volumes kinda like a loudness circuit.
All of our testing has shown that in systems like what is found in the C6 (non-SMART AMP) are flat at any volume (from the deck). The above analysis does not agree with our findings.
When using a Slash series or A Series amp (amps with differential balanced inputs) the outputs of the deck can be connected directly to the amp with excellent results. Use of these makes the job very easy:
ECS
I would really love for you to buy a CleanSweep, but I can't recommend one for your car. The C6 we worked on for Stealthbox R&D had a CL441dsp installed because the owner hated the fact that the car had no audio controls in the steering wheel. Essentially, he has a $300 volume control in his console.
Put that extra money into a JL Audio
Stealthbox
Good luck with your new system.